Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797470.1_cds_XP_016455309.1_4880
CDS Infomation

[gene=LOC107779387] [db_xref=GeneID:107779387] [protein=denticleless protein homolog] [protein_id=XP_016455309.1] [location=join(13288..13357,13568..13680,13783..13891,13985..14049,15101..15139,15437..15533,15650..15737,15973..16036,16123..16199,16303..16384,16623..16702,16862..16946,17027..17095,17171..17238,17313..17361,17516..17878)] [gbkey=CDS]
Sequence

ATGGAAGGATCAAATAAGCATCAATCTTTTTTCCAAGATATCAAATCAAGAGAACTTCAC
GGATTCCGAGTTAAAAAAAGACCATATATCAGCATTGAATCGTCTGAGGTTGACCAAATT
GGTGCCCTCGCTGTTGAGCACAATGGCAACACGCCACCTCCAATGGCCGTCTCGTTCTGC
AAGACAAGTGAAAATTCACATATTCTTGCTGTTGCTGATGAGGGTGGCTATGTTAGCTTG
TATAATACCAGGTTGAAATTTCCCCCTTCATCAACACACCAGCAAAATGCAGAAAAATCT
AAGATGTCAGAGTGGGTCGCTCATGAAAATGCTATATTTGATGTATGTTGGATCAAGGAT
GATATGAATATCTTAACTGCTTCAGGCGATCAATGCATAAAGGTATGGGATGCACAAGAA
AAGCAGTGTATTAGAGCATTAATGGGTCACACCGGGAGTGTGAAATCCATTTGTTCTCAT
CCTACGAATCAGGATATTATTGTATCTGGTTCAAGAGATGGCTCCTTTTCCCTATGGGAC
TTGAGGAGCTCGTGCAGCAGCAGTCACATATTTTCCATACCGTCAATTGCAGCAGTCCAC
AAGGCTCACGTTTCTCCTCGTCAGCGGCGGGTTAAAGGTGGAAAGGCTACTTCCATGAGC
ATTACTTCAGTCCTTTACCTGAAAGATGAGATCTCCATTGCTACTGCTGGAGCAGTTGAC
AGTGCCATAAAGTTTTGGGATACCAGAAACCTGAAGAGTCCTATTCTCCAGGCATGCCCT
CATCCTAATGTGTCATCCCATAAGGGAAAGCGATTACATGGAGTATCTAGTTTATCTCAA
GATTTAAATGGCGTGTTTATTGCTGCTTCATGCATGGACAGCAGAATCTATCTCTACAAT
GTGCTTCAGCCAGAAAAAGGGCCAGTGAAAACTTTCACAGGATGCCAAATTAATTCATTT
TTTGTTAAGTCAGCGATAAGTCCTGATGCAGCTCATGTACTCAGTGGTTCCAGTGATGGA
AATGCCTATATATGGCAGGTGAACAAACCTCTAGCAGATCCCCTTATATTGAAAAACCAT
GATGGAGAAGTTACAGCAGTAGACTGGTGCCCATCTGAGACAGGAAAAGTTGCTACAGCA
TCAGATGATTTCACGGTACGCTTTTGGAACATTCAAAGCAGTTGTTACTCAAACACAAGA
TCTCCATCGTCCATTCGAAGAAGAGTAATGGGACTTACTAACATAGAACGTCGCAAGCTG
TTCGCTGATGAAAAACCAGTGAGCATCAAGAATGACTCTGATGACTGTCATTCAGAAAAC
TTGCCAAATTTAACTAAGACTCCTGAAATCAGCACACCAGAGTCACATAAGATGAAACAT
TTTCAGAGTTTTGAAGTTGAAGAGAACTTAGAGCGAACTCCAGAAGCTGCAAGCAAGAGC
CCTTCTTCGGTTCTGAATCCTCCATCCTCTTTGAAGAGGACGATTAGAGATTATTTTATG
CACAGTCAATCAGATTAA

Peptide Sequence

PEP ID

XP_016455309.1
PEP Infomation

PREDICTED: denticleless protein homolog [Nicotiana tabacum]
Sequence

MEGSNKHQSFFQDIKSRELHGFRVKKRPYISIESSEVDQIGALAVEHNGNTPPPMAVSFC
KTSENSHILAVADEGGYVSLYNTRLKFPPSSTHQQNAEKSKMSEWVAHENAIFDVCWIKD
DMNILTASGDQCIKVWDAQEKQCIRALMGHTGSVKSICSHPTNQDIIVSGSRDGSFSLWD
LRSSCSSSHIFSIPSIAAVHKAHVSPRQRRVKGGKATSMSITSVLYLKDEISIATAGAVD
SAIKFWDTRNLKSPILQACPHPNVSSHKGKRLHGVSSLSQDLNGVFIAASCMDSRIYLYN
VLQPEKGPVKTFTGCQINSFFVKSAISPDAAHVLSGSSDGNAYIWQVNKPLADPLILKNH
DGEVTAVDWCPSETGKVATASDDFTVRFWNIQSSCYSNTRSPSSIRRRVMGLTNIERRKL
FADEKPVSIKNDSDDCHSENLPNLTKTPEISTPESHKMKHFQSFEVEENLERTPEAASKS
PSSVLNPPSSLKRTIRDYFMHSQSD

Transcript Sequence

Gene sequence data has not been registered.